Publications

This section includes a list of the latest IPNA scientific articles published in journals included in the Science Citation Index (SCI).

In DIGITAL.CSIC, institutional repository of the CSIC, you can find the complete list of scientific articles since 1962, as well as other collections of interest such as congresses, theses, books, informative material, etc. of the centre. The aim of DIGITAL.CSIC is to organize, preserve and disseminate in open access the results of our research.

In the institutional repository of the CSIC, you can find the complete list of scientific articles, as well as other collections of interest such as congresses, theses, books, informative material, etc.

Go to Digital - CSIC

 

Analysis of the IPNA 2014-2019 Scientific Production: bibliometric analysis from data collected in Scopus and Web of Science.

 

Image
Digital CSIC

The toxic benthic dinoflagellate Prorocentrum maculosum Faust is a synonym of Prorocentrum hoffmannianum Faust

Three strains of the toxic benthic dinoflagellate Prorocentrum hoffmannianum were isolated in the Canary Islands (north-east Atlantic Ocean, Spain). The identity of the strains was determined by phylogenetic analyses of partial LSU rDNA (D1-D2 regions) but their morphology based on SEM images corresponded to P. maculosum. Their toxin profiles were analyzed by liquid chromatography and high resolution mass spectrometry analysis (LC–HRMS) on cell extracts and culture media. Okadaic acid and three analogs were detected in all strains. Rather, in culture media the detected compounds were variable among strains, two of them being okadaic acid analogs not found on cell extracts. As a result, the taxonomy of the species was revised and P. maculosum is proposed as a junior synonym of P. hoffmannianum whose description is emended.

Rodríguez, Francisco; Riobó, Pilar; Crespín, Guillermo D.; Daranas, Antonio H.; De Vera, Caterina R.; Norte, Manuel; Fernández, José J.; Fraga, Santiago

Harmful Algae 78: 1-8 (2018)
DOIDigital.CSIC

Identification and quantification, by NMR and LC-MS, of sterols isolated from the marine sponge Aplysina aerophoba

Aplysterol, several didehydroaplysterols, and their acetylated derivatives were isolated from samples of the marine sponge Aplysina aerophoba, which had been collected on the coast of the Canary Islands, and were identified by chromatography and H-and C-NMR spectroscopy. A quantitative analysis was done, based on the relative intensities of the signals corresponding to the olefinic quaternary carbons from the C-NMR spectrum at 125 MHz. Finally, the results described were confirmed by ultra-high performance liquid chromatography tandem mass spectrometry (UHPLC-MS/MS).

Ferriol, Pere; Toledo Marante; Francisco J.; Brouard, Ignacio; Santana Rodríguez, José J.; Guedes Alonso, Rayco; González Benkovics, Alba; Mioso, Roberto

Records of Natural Products 12(5): 470-479 (2018)
DOIDigital.CSIC

Studies on the sesquiterpene lactones from Laurus novocanariensis lead to the clarification of the structures of 1-epi-tatridin B and its epimer tatridin B

The germacranolide 1-epi-tatridin B has been isolated from the aerial parts of Laurus novocanariensis. We have observed that the identification of this lactone and its epimer tetradin B in the scientific literature is confusing and contradictory. We have therefore studied this issue clarifying errors and contributing to the structural elucidation of other related products. Moreover, we have isolated from this plant a lactone with an 1,5-ether bridge, previously obtained from Austrolabium candidum. We have now named it austroliolide, reassigned its C NMR spectrum and compared its structure with that of badgerin. In addition, we have also isolated from L. novocanariensis the known germacranolides artemorin, costunolide, tatridin A, tulirinol and verlotorin, the eudesmanolides β-cyclopyrethrosin, 1β-hydroxy-arbusculin A, magnoliaolide and reynosin, and the guaianolide dehydrocostus lactone.

Fraga, Braulio M.; Terreno, David; Cabrera, Inmaculada; Reina, Matías

Phytochemistry 153: 48-52 (2018)
DOIDigital.CSIC

Why the COI barcode should be the community DNA metabarcode for the metazoa

Metabarcoding of complex metazoan communities is increasingly being used to measure biodiversity in terrestrial, freshwater and marine ecosystems, revolutionizing our ability to observe patterns and infer processes regarding the origin and conservation of biodiversity. A fundamentally important question is which genetic marker to amplify, and although the mitochondrial cytochrome oxidase subunit I (COI) gene is one of the more widely used markers in metabarcoding for the Metazoa, doubts have recently been raised about its suitability. We argue that (a) the extensive coverage of reference sequence databases for COI; (b) the variation it presents; (c) the comparative advantages for denoising protein-coding genes; and (d) recent advances in DNA sequencing protocols argue in favour of standardizing for the use of COI for metazoan community samples. We also highlight where research efforts should focus to maximize the utility of metabarcoding.

Andújar, Carmelo; Arribas, Paula; Yu, Douglas W.; Vogler, Alfried P.; Emerson, Brent C.

 

Molecular Ecology 27(20): 3968-3975 (2018)
DOIDigital.CSIC

Unraveling behavioral and pace-of-life syndromes in a reduced parasite and predation pressure context: personality and survival of the Barbary ground squirrel

Personality traits overlap in behavioral syndromes that are assumed to be related to physiology and life history traits, shaping pace-of-life syndromes. Boldness and explorative behavior are frequently associated with higher parasite loads, increased resource acquisition, less efficient antipredator behavior, and reduced survival (e.g., through predation). We explored how personality is related to these biological traits using an invasive species—Atlantoxerus getulus in Fuerteventura island—as a model system with reduced parasitism and low predation pressure. We used breath rate during handling, open field tests, and escape trials to test for the existence of interindividual differences in boldness, explorative behavior, and escape speed, respectively. We also tested whether the personality traits were related and formed behavioral syndromes in A. getulus. At the same time, we explored how personality is related to ectoparasite load, body condition, and survival in the species. We found strong between-individual differences in breath rate, readiness to get in the open field arena, and escape speed. We found a behavioral syndrome, linking open field entrance and escape speed, in A. getulus. However, personality was not related to parasite load or body condition and survival was higher for bolder individuals. As a whole, our results suggest reduced parasites and predator pressures on Fuerteventura may have potentially neutralized the typical drawbacks of a fast pace-of-life in the introduced population of A. getulus. Significance statement: Research on the interactions of animal personality with other ecological and evolutionary factors, such as parasitism and selection gradients, has yielded some intriguing perspectives about many ecological and evolutionary processes. However, our understanding of the eco-evolutionary consequences of animal personality and how it interacts with other relevant biological processes is still limited. Invasive species often experience specific ecological conditions that can allow testing of the general assumptions related to animal personality. The present contribution explores if and how personality traits are related to key ecological and evolutionary factors, such as parasitism and survival, in the context of an invasive population subjected to reduced parasite and predation pressure. Unlike other studies conducted under different ecological contexts, our results suggest Barbary ground squirrels from the assessed population with fast pace-of-life syndromes have higher survival chances than their counterparts.

Piquet, Julien C.; López-Darias, Marta; van der Marel, Annemarie; Nogales, Manuel; Waterman, Jane

Behavioral Ecology and Sociobiology 72: 147 (2018)
DOIDigital.CSIC

Synthetic molecules for disruption of the MYC protein-protein interface

MYC is a key transcriptional regulator involved in cellular proliferation and has established roles in transcriptional elongation and initiation, microRNA regulation, apoptosis, and pluripotency. Despite this prevalence, functional chemical probes of MYC function at the protein level have been limited. Previously, we discovered 5a, that binds to MYC with potency and specificity, downregulates the transcriptional activities of MYC and shows efficacy in vivo. However, this scaffold posed intrinsic pharmacokinetic liabilities, namely, poor solubility that precluded biophysical interrogation. Here, we developed a screening platform based on field-effect transistor analysis (Bio-FET), surface plasmon resonance (SPR), and a microtumor formation assay to analyze a series of new compounds aimed at improving these properties. This blind SAR campaign has produced a new lead compound of significantly increased in vivo stability and solubility for a 40-fold increase in exposure. This probe represents a significant advancement that will not only enable biophysical characterization of this interaction and further SAR, but also contribute to advances in understanding of MYC biology.

Jacob, Nicholas T.; Miranda, Pedro O.; Shirey, Ryan J.; Gautam, Ritika; Zhou, Bin; de Orbe Izquierdo, M. Elena; Hixon, Mark S.; Hart, Jonathan R.; Ueno, Lynn; Vogt, Peter K.; Janda, Kim D.

Bioorganic and Medicinal Chemistry 26(14): 4234-4239 (2018)
DOIDigital.CSIC

Oxa/thiazole-tetrahydropyran triazole-linked hybrids with selective antiproliferative activity against human tumour cells

Inspired by diverse marine bioactive compounds, the principle of molecular hybridization was applied to produce a series of new compounds combining diverse heterocyclic systems (oxa/thiazoles and tetrahydropyrans) via a triazole ring, attempting to increase the activity of individual building blocks. These new compounds exhibit a highly interesting antiproliferative activity against different human tumour cells and good selectivity when compared to normal cells. The formation of reactive oxygen species and the interaction with P-gp were also evaluated for the lead compounds.

Valdomir, Guillermo; Fernández, María de los Ángeles; Lagunes, Irene; Padrón, Juan I.; Martín, Víctor S.; Padrón, José M.; Davyt, Danilo

New Journal of Chemistry 42: 13784-13789 (2018)
DOIDigital.CSIC

Hidden biodiversity: total evidence phylogenetics and evolution of morphological traits in a highly Diverse lineage of endogean ground beetles, Typhlocharis Dieck, 1869 (Carabidae, Trechinae, Anillini)

Typhlocharis is the most diverse eyeless endogean ground beetle genus known to date, with 62 species all endemic to the West Mediterranean region. The lineage is characterized by a conservative and singular body plan within Carabidae that contrasts with a high morphological diversity in many traits. We provide an exhaustive phylogeny of the lineage through the study of 92 morphological characters from all 62 described species and 45 potential new species from 70 additional populations, and the combination of morphological and available molecular data, in the first total evidence phylogenetic approach for a highly diverse endogean lineage. We tracked the evolution of morphological traits over the obtained phylogenies. Results suggest eight morphologically distinct clades, which do not correspond to the species groups proposed formerly. Ancestral state reconstructions and phylogenetic signal analyses of morphological traits revealed that some of the previously key characters to the classification of Typhlocharis, such as the umbilicate series or the apical denticles of elytra, are highly homoplasic, whereas other characters show stronger phylogenetic signal, including structures in the antennae, gula, pronotum and last abdominal ventrite. This evidence supports the split of Typhlocharis into three genera: Lusotyphlus gen. nov.; Typhlocharis Dieck, 1869 and Microcharidius Coiffait, 1969 (revalidated), forming the subtribe Typhlocharina Jeanne, 1973.

Pérez-González, Sergio; Andújar, Carmelo; Pérez Zaballos, Juan

Cladistics 34: 359-383 (2018)
DOIDigital.CSIC

Humulene derivatives from Saharian Asteriscus graveolens

Three new sesquiterpene-humulenes, (−)- asteriscunolides I (1), J (2) and (−)-(2Z,6E,9Z)-8-oxo-1α-acetoxy-2,6,9-humulatrien-12-oic acid (3) were isolated from the leaves-flowers of the Saharan medicinal plant Asteriscus graveolens along with six known compounds. The structures of the compounds were determined on the basis of spectroscopic mono and bidimensional NMR, mass spectrometry and by single-crystal X-ray diffraction. Compounds 1–3 were evaluated for cytotoxic assay, no significant activity was detected.

Hammoud, Leila; León, Francisco; Brouard, Ignacio; González-Platas, Javier; Benayache, Samir; Mosset, Paul; Benayache, Fadila

 

Tetrahedron Letters 59(27): 2668-2670 (2018)
DOIDigital.CSIC

The 'terroirist' social movement: The reawakening of wine culture in Spain

This paper explores the emergence of the terroirist social movement in Spain and the controversies arising from it. We assess its role in transforming the Spanish wine scene and wine regions from the combined perspective of rural and social movement studies. Spain boasts the largest surface area of vineyards and the largest volume of wine exports of any country, yet it also sells the cheapest wine and lacks wine zoning policies, which makes Spain unique among traditional wine-producing countries. Considering this situation, a group of terroir-driven winemakers are challenging the Spanish industrial wine establishment. They have built networks in rural areas throughout the country and are actively involved in local grassroots movements, aiming to produce quality wines with added value, recover neglected wine regions and grape varieties, and reinstate traditional wine culture. While the movement displays certain elite and populist tendencies, it remains radical in its attempt to challenge a deep-seated economic model dominated by large companies with a powerful lobby that influences the government.

Alonso González, Pablo; Parga-Dans, Eva

Journal of Rural Studies 61: 184-196 (2018)
DOIDigital.CSIC