Volatile composition of light red wines aged in Canary pine barrels from La Palma (Canary Islands, Spain)

Multivarietal wines aged in barrels made from the resinous heartwood of the Canary Pine (Vinos de Tea) in La Palma (Canary Islands, Spain) were analysed, together with a control sample and a Greek Retsina wine. The concentrations of various families of varietal and fermentative volatile compounds were determined by gas chromatography and mass spectrometry. Results showed the significant presence of the terpene family, especially terpinen-4-ol and α-terpineol (probably derived from contact with the resinous wood of the barrels), regardless of grape variety. Samples taken from commercial wineries presented significantly lower concentrations of α-terpineol than samples from traditional artisan producers. The principal component analysis clearly differentiated both from the Retsina. It also revealed a correlation between the length of time that wine aged in Canary pine barrels and a sharp increase in α-terpineol, which can be considered a marker of the typicity of these unique traditional wines on the verge of disappearance.

Alonso-González, Pablo; Parga-Dans, Eva; Ballester, Jordi.

OENO One, 56(4) : 29-40 (2022)
DOIDigital.CSIC

The Role of Reactive Species on Innate Immunity

This review examines the role of reactive species RS (of oxygen ROS, nitrogen RNS and halogen RHS) on innate immunity. The importance of these species in innate immunity was first recognized in phagocytes that underwent a “respiratory burst” after activation. The anion superoxide O2 􀀀 and hydrogen peroxide H2O2 are detrimental to the microbial population. NADPH oxidase NOx, as an O2 􀀀 producer is essential for microbial destruction, and patients lacking this functional oxidase are more susceptible to microbial infections. Reactive nitrogen species RNS (the most important are nitric oxide radical - NO, peroxynitrite ONOO— and its derivatives), are also harmful to microorganisms, including bacteria, viruses, and parasites. Hypochlorous acid HOCl and hypothiocyanous acid HOSCN synthesized through the enzyme myeloperoxidase MPO, which catalyzes the reaction between H2O2 and Cl􀀀 or SCN􀀀, are important inorganic bactericidal molecules, effective against a wide range of microbes. This review also discusses the role of antimicrobial peptides AMPs and their induction of ROS. In summary, reactive species RS are the heart of the innate immune system, and they are necessary for microbial lysis in infections that can affect mammals throughout their lives.

Curieses Andrés, Celia María; Pérez de Lastra, José Manuel ; Andrés Juan, Celia; Plou Gasca, Francisco José; Pérez-Lebeña, Eduardo.

Vaccines 10(10): 1735 (2022)
DOIDigital.CSIC

Genome editing technologies, mechanisms and improved production of therapeutic phytochemicals: Opportunities and prospects

Plants produce a large number of secondary metabolites, known as phytometabolites that may be employed as medicines, dyes, poisons, and insecticides in the field of medicine, agriculture, and industrial use, respectively. The rise of genome management approaches has promised a factual revolution in genetic engineering. Targeted genome editing in living entities permits the understanding of the biological systems very clearly, and also sanctions to address a wide-ranging objective in the direction of improving features of plant and their yields. The last few years have introduced a number of unique genome editing systems, including transcription activator-like effector nucleases, zinc finger nucleases, and miRNA-regulated clustered regularly interspaced short palindromic repeats/Cas9 (CRISPR/Cas9). Genome editing systems have helped in the transformation of metabolic engineering, allowing researchers to modify biosynthetic pathways of different secondary metabolites. Given the growing relevance of editing genomes in plant research, the exciting novel methods are briefly reviewed in this chapter. Also, this chapter highlights recent discoveries on the CRISPR-based modification of natural products in different medicinal plants.

Mitra, Sicon; Anand, Uttpal; Ghorai, Mimosa; Kant, Nishi; Kumar, Manoj; Radha; Jha, Niraj K.; Swamy, Mallappa K.; Proćków, Jarosław; Pérez de Lastra, José Manuel; Dey, Abhijit.

Biotechnology and Bioengineering (2022)
DOIDigital.CSIC

Microclimatic variation in tropical canopies: A glimpse into the processes of community assembly in epiphytic bryophyte communities

1. Epiphytic communities offer an original framework to disentangle the contributions of environmental filters, biotic interactions and dispersal limitations to community structure at fine spatial scales. We determine here whether variations in light, microclimatic conditions and host tree size affect the variation in species composition and phylogenetic structure of epiphytic bryophyte communities, and hence, assess the contribution of environmental filtering, phylogenetic constraints and competition to community assembly. 2. A canopy crane giving access to 1.1 ha of tropical rainforest in Yunnan (China) was employed to record hourly light and microclimatic conditions from 54 dataloggers and epiphytic bryophyte communities from 408 plots. Generalized Dissimilarity Modelling was implemented to analyse the relationship between taxonomic and phylogenetic turnover among epiphytic communities, host-tree characteristics and microclimatic variation. 3. Within-tree vertical turnover of bryophyte communities was significantly about 30% higher than horizontal turnover among-trees. Thus, the sharp vertical variations in microclimatic conditions from tree base to canopy are more important than differences in age, reflecting the likelihood of colonization, area, and habitat conditions between young and old trees, in shaping the composition of epiphytic bryophyte communities. 4. Our models, to which microclimatic factors contributed most (83–98%), accounted for 33% and 18% of the variation in vertical turnover in mosses and liverworts, respectively. Phylogenetic turnover shifted from significantly negative or non-significant within communities to significantly positive among communities, and was slightly, but significantly, correlated with microclimatic variation. These patterns highlight the crucial role of microclimates in determining the composition and phylogenetic structure of epiphytic communities. 5. Synthesis. The mostly non-significant phylogenetic turnover observed within communities does not support the idea that competition plays an important role in epiphytic bryophytes. Instead, microclimatic variation is the main driver of community composition and phylogenetic structure, evidencing the role of phylogenetic niche conservatism in community assembly.

Ting Shen; Corlett, Richard T.; Collart, Flavien; Kasprzyk, Thibault; Xin-Lei Guo; Patiño, Jairo; Yang Su; Hardy, Olivier J.; Wen-Zhang Ma; Jian Wang; Yu-Mei Wei; Mouton, Lea; Yuan Li; Liang Song; Vanderpoorten, Alain.

Journal of Ecology, 110(12): 3023-3038 (2022)
DOIDigital.CSIC

Alciporin, a pore-forming protein as complementary defense mechanism in Millepora alcicornis

Millepora alcicornis (Cnidaria: Hydrozoa), known as fire coral, is a tropical species settled in marine ecosystems of the Canary Islands in the last years. This hydrocoral biosynthesizes toxins involved in chemical defense and prey capture mechanisms. Toxicological studies have shown that the venom contained in the nematocysts of Millepora species is mainly composed of thermolabile proteins that display hemolytic activity, causing skin irritation and burn-like lesions upon contact. As a continuation of a previous study, the chromatographic fractionation of the aqueous extracts of M. alcicornis has confirmed the coexistence of proteins of different nature responsible for the hemolytic effects of red blood cells (RBCs) through two different mechanisms. Aside from the already described phospholipase A2 (PLA2) activity, in this work the presence of alciporin, a pore-forming protein (PFP), has been established for the first time for M. alcicornis. The sequence analysis revealed that alciporin fit an actinoporin with high homology to stichotoxins. The hemolytic effects of alciporin were analyzed and sphingomyelin was identified as its biological target. Also, the evolution of the hemolytic damage produced at the nanoscale has been studied using atomic force microscopy (AFM).

Nocchi, Nathalia; González-Orive, Alejandro; Hernández-Creus, Alberto; Lorenzo-Morales, Jacob; Rodríguez, Adriana; Morchón, Rodrigo; Díaz-Marrero, Ana R.; Fernández, José J.

Front. Mar. Sci, 9:914084: 1-15 (2022)
DOIDigital.CSIC

Nearly Three Centuries of Lava Flow Subsidence at Timanfaya, Lanzarote

The 1730–1736 eruption on Lanzarote was one of the most significant volcanic eruptions to occur on the Canary Islands, with lavas covering over 200 km 2. Globally, it is volumetrically the third largest known subaerial basaltic fissure eruption in the past 1,100 years. Here we use Sentinel-1 and ENVISAT interferograms on both ascending and descending orbits to construct a time series of line-of-sight surface displacements and calculate linear vertical deformation rates. We resolve a constant subsidence rate of about 6 mm/yr associated with an area of ∼20 km 2 within the central and western portion of the Timanfaya lava flows relative to the rest of the island. This is consistent over the 28-year period (1992–2020) covered by the Sentinel-1 and ENVISAT data when combined with the previously published European Remote-Sensing Satellite data. Time series constructed using Sentinel-1 short interval interferograms have previously been shown to suffer systematic biases and we find that by making longer period interferograms these biases can be mitigated (when compared against an averaged stack of 1-year interferograms). Cooling-driven contraction of an intrusion would require improbably large sill thickness to achieve the observed subsidence rates. Our observations are consistent with the cooling of lavas on the order of one hundred meters, twice as thick as previous estimates, which suggests overall lava volume for this eruption may have been underestimated. This is also evidence of the longest duration of lava flow subsidence ever imaged which indicates that these cumulative thick flows can continue to deform significantly even three centuries after emplacement.

Purcell, Victoria; Reddin, Eoin; Ebmeier, Susanna; González, Pablo J.; Watson, Andrew; Morishita, Yu; Elliott, John.

Geochemistry, Geophysics, Geosystems, 23(10): 1-35 (2022)
DOIDigital.CSIC

Quantitative ethnoveterinary study on plant resource utilization by indigenous communities in high-altitude regions

For millennia, ethnic knowledge has been intricately tied to local biodiversity and woven into the fabric of rural communities. Growing scientific evidence suggests that merging ethnic knowledge with new scientific findings can lead to socially acceptable and environmentally friendly approaches essential for the long-term prosperity of local communities. In the high-altitude region, where livestock raising is a key income source, and plant-based utilization for ethno-veterinary practices is widely practiced. In this context, this study was conducted with the aim of documenting the ethno-veterinary use of plant resources in different bio-geographical regions of Jammu and Kashmir's Himalayas (J & KH). Semi-structured interviews and group discussions were used to collect information. Principal component analysis (PCA) and Pearson correlation were conducted to analyze the data. We documented 148 species from 53 families that locals used for various purposes: medicine, fodder, tonic, antidote, magic, and also used to protect themselves from ectoparasite such as Pediculus humanus capitis by the local inhabitants. There were significant differences in the relative usage of plant resources across the three biogeographic regions. Comparatively, the highest number (41%) of plant species were used for ethnoveterinary in the Jammu region, while the lowest number (28%) of species were used in Kashmir. Across the regions, Kashmir and Jammu had the highest level of species similarity (17%), while Jammu and Ladakh had the lowest (1%). A cross-regional assessment of plant resources revealed that 18% of plants were shared among the regions. The reported use of Amaranthus blitum, Morus alba, Ficus palmata, Vitex negundo, Juniperus semiglobosa, Ulmus wallichiana, and Rumex nepalensis are novel for the ethno-veterinary uses of this part of the Himalayan region. The various dry unique traditional fodder preparations (gaaslov, gass khor, pan baath, kaandbaath, Lovgooad, Karb, and Phungma) from plant resources are reported for the first time from the Himalayan region and can be ascribed to the novelty of this study. Plant resources were not only a source of fodder and medicine but also presented themselves as an opportunity for livelihood generation. Therefore, our findings bridge the knowledge gap by documenting key ethnoveterinary applications of native plant species from the study region that are used to cure livestock diseases and disorders by the mountain inhabitants.

Haq, Shiekh Marifatul; Yaqoob, Umer; Majeed, Muhammad; Amjad, Muhammad Shoaib; Hassan, Musheerul; Ahmad, Riyaz; Waheed, Muhammad; Bussmann, Rainer Willi; Soares Calixto, Eduardo; Proćków, Jarosław; Pérez de Lastra, José Manuel; Morales-delaNuez, Antonio.

Frontiers in Veterinary Science 9: 944046 (2022)
DOIDigital.CSIC

Metabarcoding for biodiversity inventory blind spots: A test case using the beetle fauna of an insular cloud forest

Soils harbour a rich arthropod fauna, but many species are still not formally described (Linnaean shortfall) and the distribution of those already described is poorly understood (Wallacean shortfall). Metabarcoding holds much promise to fill this gap, however, nuclear copies of mitochondrial genes, and other artefacts lead to taxonomic inflation, which compromise the reliability of biodiversity inventories. Here, we explore the potential of a bioinformatic approach to jointly “denoise” and filter nonauthentic mitochondrial sequences from metabarcode reads to obtain reliable soil beetle inventories and address open questions in soil biodiversity research, such as the scale of dispersal constraints in different soil layers. We sampled cloud forest arthropod communities from 49 sites in the Anaga peninsula of Tenerife (Canary Islands). We performed whole organism community DNA (wocDNA) metabarcoding, and built a local reference database with COI barcode sequences of 310 species of Coleoptera for filtering reads and the identification of metabarcoded species. This resulted in reliable haplotype data after considerably reducing nuclear mitochondrial copies and other artefacts. Comparing our results with previous beetle inventories, we found: (i) new species records, potentially representing undescribed species; (ii) new distribution records, and (iii) validated phylogeographic structure when compared with traditional sequencing approaches. Analyses also revealed evidence for higher dispersal constraint within deeper soil beetle communities, compared to those closer to the surface. The combined power of barcoding and metabarcoding contribute to mitigate the important shortfalls associated with soil arthropod diversity data, and thus address unresolved questions for this vast biodiversity fraction.

Arjona, Yurena; Arribas, Paula; Salces-Castellano, Antonia; López, Heriberto; Emerson, Brent C.; Andújar, Carmelo.

Molecular Ecology, 00: 1-17 (2022)
DOIDigital.CSIC

Structure-activity relationships reveal a 2-furoyloxychalcone as a potent cytotoxic and apoptosis inducer for human U-937 and HL-60 leukaemia cells

Synthetic flavonoids with new substitution patterns have attracted attention as potential anticancer drugs. Here, twelve chalcones were synthesized and their antiproliferative activities against five human tumour cells were evaluated. This series of chalcone derivatives was characterized by the presence of an additional aromatic or heterocyclic ring linked by an ether, in the case of a benzyl radical, or an ester or amide functional group in the case of a furoyl radical. In addition, the influence on cytotoxicity by the presence of one or three methoxy groups or a 2,4-dimethoxy-3-methyl system on the B ring of the chalcone scaffold was also explored. The results revealed that the most cytotoxic chalcones contain a furoyl substituent linked by an ester or an amide through the 2′-hydroxy or the 2′-amino group of the A ring of the chalcone skeleton, with IC50 values between 0.2 ± 0.1 μM and 1.3 ± 0.1 μM against human leukaemia cells. The synthetic chalcone 2′-furoyloxy-4-methoxychalcone (FMC) was, at least, ten-fold more potent than the antineoplastic agent etoposide against U-937 cells and displayed less cytotoxicity against human peripheral blood mononuclear cells. Treatment of U-937 and HL-60 cells with FMC induced cell cycle arrest at the G2-M phase, an increase in the percentage of sub-G1 and annexin-V positive cells, the release of mitochondrial cytochrome c, activation of caspase and poly(ADP-ribose) polymerase cleavage. In addition, it inhibited tubulin polymerization in vitro in a concentration dependent manner. Cell death triggered by this chalcone was decreased by the pan-caspase inhibitor z-VAD-fmk and was dependent of the generation of reactive oxygen species. We conclude that this furoyloxychalcone may be useful in the development of a potential anti-leukaemia strategy.

Rosario, Henoc del; Saavedra, Ester; Brouard, Ignacio; González-Santana, Daniel; García Cortés, Celia; Spínola-Lasso, Elena; Tabraue, Carlos; Quintana, José; Estévez, Francisco.

Bioorganic Chemistry 127: 105926 (2022)
DOIDigital.CSIC

Revisiting the introduction history of Campylopus introflexus (Hedw.) Brid. in the Northern Hemisphere: first record and current distribution in Tenerife (Canary Islands, Spain)

Sicilia-Pasos, Guillermo; Losada-Lima, Ana; Jay-García, Louis S.; Martins, Anabela; Sim-Sim, Manuela; Patiño, Jairo.

Journal of Bryology, 44(2): 1-6 (2022)
DOIDigital.CSIC